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The Chymistry of Isaac Newton
This site "is producing a scholarly online edition of Newton's alchemical manuscripts integrated with new research on Newton's chymistry. ... [A]bout two hundred fifty [pages] have been edited and are available online, including Newton's Most Complete Laboratory Notebook [written between 1669 and 1693]." The site includes text transcriptions, interpretive notes, and a guide to symbols relating to these materials first discovered in 1936. From Indiana University.
http://webapp1.dlib.indiana.edu/newton/index.jsp

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